Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga11Q91XY8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga11Q91XY8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Pcdhga11Q91XY8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga11Q91XY8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga11Q91XY8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga11Q91XY8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Mir1895-201ENSMUST00000122615 79 ntBASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Gm18057-201ENSMUST00000208220 503 ntBASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga11Q91XY8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Gm27494-201ENSMUST00000184735 189 ntBASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga11Q91XY8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms