Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Gm9182-201ENSMUST00000217829 639 ntBASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Gm5186-201ENSMUST00000218781 920 ntBASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ddx41Q91VN6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx41Q91VN6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx41Q91VN6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.21■□□□□ 0.18
Ddx41Q91VN6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx41Q91VN6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx41Q91VN6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Gm6222-201ENSMUST00000120787 396 ntBASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Gm16215-201ENSMUST00000161990 637 ntBASIC16.2■□□□□ 0.18
Ddx41Q91VN6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Dupd1-202ENSMUST00000224735 548 ntBASIC16.2■□□□□ 0.18
Ddx41Q91VN6 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx41Q91VN6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.19■□□□□ 0.18
Ddx41Q91VN6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx41Q91VN6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.19■□□□□ 0.18
Ddx41Q91VN6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Gm15653-201ENSMUST00000119247 907 ntBASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx41Q91VN6 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms