Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gm4995-201ENSMUST00000117247 432 ntBASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gm11594-201ENSMUST00000122313 162 ntBASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gm18889-201ENSMUST00000174284 929 ntBASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H1fooQ8VIK3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Gm13365-201ENSMUST00000121188 973 ntBASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.81□□□□□ -0.52
H1fooQ8VIK3 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.81□□□□□ -0.52
H1fooQ8VIK3 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.81□□□□□ -0.52
H1fooQ8VIK3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H1fooQ8VIK3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms