Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gm27459-201ENSMUST00000184860 107 ntBASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gm34391-201ENSMUST00000203706 907 ntBASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gm45167-201ENSMUST00000208007 322 ntBASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm24589-201ENSMUST00000116692 94 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm7222-201ENSMUST00000117512 906 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44357-201ENSMUST00000195897 142 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm19658-201ENSMUST00000196231 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44367-201ENSMUST00000196836 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44350-201ENSMUST00000197197 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44390-201ENSMUST00000197533 144 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44313-201ENSMUST00000198018 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44486-201ENSMUST00000198508 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44314-201ENSMUST00000199263 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44394-201ENSMUST00000199558 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44484-201ENSMUST00000199873 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44466-201ENSMUST00000200264 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm44359-201ENSMUST00000200671 138 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.23□□□□□ -0.13
Rpa1Q8VEE4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa1Q8VEE4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms