Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rprd1aQ8VDS4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Mir7684-201ENSMUST00000183858 60 ntBASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rprd1aQ8VDS4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rprd1aQ8VDS4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rprd1aQ8VDS4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rprd1aQ8VDS4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rprd1aQ8VDS4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rprd1aQ8VDS4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rprd1aQ8VDS4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rprd1aQ8VDS4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rprd1aQ8VDS4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gm3436-201ENSMUST00000179930 840 ntBASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gm33320-201ENSMUST00000192232 530 ntBASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gm43703-201ENSMUST00000200523 763 ntBASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rprd1aQ8VDS4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rprd1aQ8VDS4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms