Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lsm1Q8VC85 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Gm15467-201ENSMUST00000120582 445 ntBASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Gm38225-201ENSMUST00000194001 393 ntBASIC13.53□□□□□ -0.24
Lsm1Q8VC85 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm1Q8VC85 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm1Q8VC85 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm1Q8VC85 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Gm11745-201ENSMUST00000121669 448 ntBASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.51□□□□□ -0.25
Lsm1Q8VC85 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms