Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm12260-201ENSMUST00000122447 411 ntBASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm9727-201ENSMUST00000161387 555 ntBASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm17271-201ENSMUST00000165535 355 ntBASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm45098-201ENSMUST00000207179 657 ntBASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.1□□□□□ -0.31
H2afjQ8R1M2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Gm9385-201ENSMUST00000117563 472 ntBASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Mir8117-201ENSMUST00000184773 107 ntBASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afjQ8R1M2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms