Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf7Q8R0S1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Gm14701-201ENSMUST00000117156 348 ntBASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atf7Q8R0S1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Atf7Q8R0S1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Atf7Q8R0S1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Gm8410-201ENSMUST00000117225 605 ntBASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Gm25948-201ENSMUST00000175334 112 ntBASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Gm27622-201ENSMUST00000183779 60 ntBASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf7Q8R0S1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.63■□□□□ 0.25
Atf7Q8R0S1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Gm6916-202ENSMUST00000205523 195 ntBASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.63■□□□□ 0.25
Atf7Q8R0S1 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.63■□□□□ 0.25
Atf7Q8R0S1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms