Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Sybu-209ENSMUST00000228639 4113 ntBASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx54Q8K4L0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 CT030182.1-201ENSMUST00000225935 533 ntBASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Gm5161-201ENSMUST00000075243 853 ntBASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx54Q8K4L0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Gm9333-201ENSMUST00000205452 1323 ntBASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Gm5687-201ENSMUST00000118252 640 ntBASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Gm20482-202ENSMUST00000174729 825 ntBASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Gm26927-201ENSMUST00000182385 965 ntBASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx54Q8K4L0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Gm13461-201ENSMUST00000120980 662 ntBASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.27■□□□□ 0.52
Ddx54Q8K4L0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms