Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Gm5566-201ENSMUST00000116118 459 ntBASIC13.34□□□□□ -0.27
Clrn1Q8K445 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.34□□□□□ -0.27
Clrn1Q8K445 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.34□□□□□ -0.27
Clrn1Q8K445 AA619741-201ENSMUST00000195095 646 ntBASIC13.34□□□□□ -0.27
Clrn1Q8K445 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Gm45453-201ENSMUST00000211758 853 ntBASIC13.34□□□□□ -0.27
Clrn1Q8K445 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Clrn1Q8K445 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clrn1Q8K445 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clrn1Q8K445 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clrn1Q8K445 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.33□□□□□ -0.28
Clrn1Q8K445 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Gm27430-201ENSMUST00000184585 107 ntBASIC13.33□□□□□ -0.28
Clrn1Q8K445 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Gm44333-201ENSMUST00000197168 107 ntBASIC13.33□□□□□ -0.28
Clrn1Q8K445 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.33□□□□□ -0.28
Clrn1Q8K445 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.33□□□□□ -0.28
Clrn1Q8K445 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn1Q8K445 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.32□□□□□ -0.28
Clrn1Q8K445 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Mir125a-201ENSMUST00000083545 68 ntBASIC13.32□□□□□ -0.28
Clrn1Q8K445 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn1Q8K445 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.31□□□□□ -0.28
Clrn1Q8K445 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn1Q8K445 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn1Q8K445 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn1Q8K445 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms