Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap2Q8K389 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Gm14608-201ENSMUST00000120030 1553 ntBASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Gm10146-201ENSMUST00000072739 309 ntBASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Gm43179-201ENSMUST00000198797 275 ntBASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap2Q8K389 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap2Q8K389 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 CT573086.1-201ENSMUST00000227202 1074 ntBASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap2Q8K389 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Gm11793-201ENSMUST00000120433 981 ntBASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap2Q8K389 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap2Q8K389 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap2Q8K389 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap2Q8K389 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap2Q8K389 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms