Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cchcr1Q8K2I2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.69■□□□□ 0.26
Cchcr1Q8K2I2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Gm6222-201ENSMUST00000120787 396 ntBASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Gm6443-201ENSMUST00000203599 874 ntBASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 BC001981-202ENSMUST00000191393 1545 ntBASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Cchcr1Q8K2I2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Gm18889-201ENSMUST00000174284 929 ntBASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Gm18049-201ENSMUST00000208909 581 ntBASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cchcr1Q8K2I2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms