Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Gm24196-201ENSMUST00000179161 110 ntBASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim52Q8CDV4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim52Q8CDV4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim52Q8CDV4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms