Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm13015-201ENSMUST00000118674 204 ntBASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Gm13365-201ENSMUST00000121188 973 ntBASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Mir1895-201ENSMUST00000122615 79 ntBASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc38Q8CDN8 BC001981-202ENSMUST00000191393 1545 ntBASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc38Q8CDN8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Gm43321-201ENSMUST00000198897 2409 ntBASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc38Q8CDN8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms