Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Gm27920-201ENSMUST00000183953 96 ntBASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps53Q8CCB4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Gm7488-201ENSMUST00000117148 684 ntBASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.43■□□□□ 0.22
Vps53Q8CCB4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps53Q8CCB4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Gm14042-201ENSMUST00000120139 833 ntBASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Gm9063-201ENSMUST00000223299 582 ntBASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps53Q8CCB4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Gm18766-201ENSMUST00000189811 808 ntBASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Gm9182-201ENSMUST00000217829 639 ntBASIC16.41■□□□□ 0.22
Vps53Q8CCB4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Vps53Q8CCB4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms