Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Mir7085-201ENSMUST00000184353 66 ntBASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa4Q8CA71 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.29■□□□□ 0.2
Shisa4Q8CA71 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa4Q8CA71 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Gm28760-201ENSMUST00000185995 736 ntBASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa4Q8CA71 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.27■□□□□ 0.2
Shisa4Q8CA71 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa4Q8CA71 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa4Q8CA71 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms