Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Gm5866-201ENSMUST00000177881 973 ntBASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Gm28760-201ENSMUST00000185995 736 ntBASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.42■□□□□ 0.22
Alx1Q8C8B0 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.42■□□□□ 0.22
Alx1Q8C8B0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Syt7-205ENSMUST00000224135 1557 ntBASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx1Q8C8B0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Gm17795-201ENSMUST00000214505 757 ntBASIC16.41■□□□□ 0.22
Alx1Q8C8B0 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx1Q8C8B0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx1Q8C8B0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms