Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf2Q8BZT2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Gm18187-201ENSMUST00000196476 984 ntBASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf2Q8BZT2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Sh3rf2Q8BZT2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Gm14127-201ENSMUST00000117906 678 ntBASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Gm15240-201ENSMUST00000118156 720 ntBASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Gm18905-201ENSMUST00000205454 928 ntBASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh3rf2Q8BZT2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sh3rf2Q8BZT2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms