Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Gm8213-201ENSMUST00000118191 441 ntBASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.98□□□□□ -0.65
Chd9Q8BYH8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd9Q8BYH8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd9Q8BYH8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm25880-201ENSMUST00000104331 132 ntBASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm9726-201ENSMUST00000180321 678 ntBASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Gm25517-201ENSMUST00000083865 134 ntBASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd9Q8BYH8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Dapk1-207ENSMUST00000226059 5009 ntBASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd9Q8BYH8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms