Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Gm22175-201ENSMUST00000175007 78 ntBASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.29□□□□□ -0.12
Usp43Q8BUM9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.29□□□□□ -0.12
Usp43Q8BUM9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Gm15653-201ENSMUST00000119247 907 ntBASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.28□□□□□ -0.12
Usp43Q8BUM9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Usp43Q8BUM9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Gm27618-201ENSMUST00000183671 60 ntBASIC14.27□□□□□ -0.13
Usp43Q8BUM9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp43Q8BUM9 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms