Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.43□□□□□ -0.1
Nup54Q8BTS4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Gm16215-201ENSMUST00000161990 637 ntBASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nup54Q8BTS4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Gm7730-201ENSMUST00000212486 454 ntBASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nup54Q8BTS4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Gm21854-201ENSMUST00000179901 471 ntBASIC14.41□□□□□ -0.1
Nup54Q8BTS4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.41□□□□□ -0.1
Nup54Q8BTS4 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nup54Q8BTS4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup54Q8BTS4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms