Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne3Q8BT60 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne3Q8BT60 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cpne3Q8BT60 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne3Q8BT60 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne3Q8BT60 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne3Q8BT60 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cpne3Q8BT60 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.64□□□□□ -0.23
Cpne3Q8BT60 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpne3Q8BT60 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Gm11025-201ENSMUST00000140773 466 ntBASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpne3Q8BT60 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpne3Q8BT60 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms