Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scfd1Q8BRF7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scfd1Q8BRF7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Mir698-201ENSMUST00000102164 109 ntBASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Gm14127-201ENSMUST00000117906 678 ntBASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Gm8584-201ENSMUST00000171982 758 ntBASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scfd1Q8BRF7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scfd1Q8BRF7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms