Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sfr1Q8BP27 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sfr1Q8BP27 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.4□□□□□ -0.1
Sfr1Q8BP27 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Gm27533-201ENSMUST00000183800 152 ntBASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.39□□□□□ -0.11
Sfr1Q8BP27 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Gm15653-201ENSMUST00000119247 907 ntBASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Gm17837-201ENSMUST00000186435 985 ntBASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Gm16476-201ENSMUST00000221544 139 ntBASIC14.38□□□□□ -0.11
Sfr1Q8BP27 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.38□□□□□ -0.11
Sfr1Q8BP27 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sfr1Q8BP27 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 BC001981-202ENSMUST00000191393 1545 ntBASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Gm13453-201ENSMUST00000118708 357 ntBASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Gm6888-201ENSMUST00000221983 706 ntBASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Dupd1-202ENSMUST00000224735 548 ntBASIC14.37□□□□□ -0.11
Sfr1Q8BP27 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.37□□□□□ -0.11
Sfr1Q8BP27 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sfr1Q8BP27 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sfr1Q8BP27 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Sfr1Q8BP27 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sfr1Q8BP27 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sfr1Q8BP27 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sfr1Q8BP27 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms