Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Gm9176-201ENSMUST00000219955 1120 ntBASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 AC132317.1-201ENSMUST00000227227 962 ntBASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Gm13123-201ENSMUST00000122173 492 ntBASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Gm3786-201ENSMUST00000202659 378 ntBASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Gm44985-201ENSMUST00000206202 1016 ntBASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col16a1Q8BLX7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Mir877-201ENSMUST00000104738 85 ntBASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Gm44064-201ENSMUST00000204964 1087 ntBASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Gm8227-201ENSMUST00000223306 571 ntBASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC18.16■□□□□ 0.5
Col16a1Q8BLX7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Gm14350-201ENSMUST00000116642 640 ntBASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Gm11618-201ENSMUST00000117946 267 ntBASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Gm6222-202ENSMUST00000182143 629 ntBASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col16a1Q8BLX7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col16a1Q8BLX7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col16a1Q8BLX7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col16a1Q8BLX7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col16a1Q8BLX7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Col16a1Q8BLX7 Gm18630-201ENSMUST00000222109 1397 ntBASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Gm12241-201ENSMUST00000118330 726 ntBASIC18.14■□□□□ 0.49
Col16a1Q8BLX7 Gm12749-201ENSMUST00000122138 1159 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms