Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gm12390-201ENSMUST00000117897 397 ntBASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gm11814-201ENSMUST00000119515 929 ntBASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gm15429-201ENSMUST00000151268 798 ntBASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gm7287-201ENSMUST00000205267 602 ntBASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
Smarcal1Q8BJL0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Gm8927-201ENSMUST00000181978 981 ntBASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Gm3222-201ENSMUST00000071282 990 ntBASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcal1Q8BJL0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Gm26464-201ENSMUST00000157094 305 ntBASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcal1Q8BJL0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcal1Q8BJL0 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.96□□□□□ -0.02
Smarcal1Q8BJL0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcal1Q8BJL0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcal1Q8BJL0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcal1Q8BJL0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcal1Q8BJL0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcal1Q8BJL0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcal1Q8BJL0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms