Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Gm37230-201ENSMUST00000194491 818 ntBASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc5a7Q8BGY9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Slc5a7Q8BGY9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slc5a7Q8BGY9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms