Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm12882-201ENSMUST00000121696 517 ntBASIC13.93□□□□□ -0.18
Ubp1Q811S7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Gm27533-201ENSMUST00000183800 152 ntBASIC13.93□□□□□ -0.18
Ubp1Q811S7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Shd-206ENSMUST00000225145 998 ntBASIC13.93□□□□□ -0.18
Ubp1Q811S7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubp1Q811S7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.92□□□□□ -0.18
Ubp1Q811S7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ubp1Q811S7 BC001981-202ENSMUST00000191393 1545 ntBASIC13.92□□□□□ -0.18
Ubp1Q811S7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 AA619741-201ENSMUST00000195095 646 ntBASIC13.92□□□□□ -0.18
Ubp1Q811S7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Gm16476-201ENSMUST00000221544 139 ntBASIC13.92□□□□□ -0.18
Ubp1Q811S7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ubp1Q811S7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.91□□□□□ -0.18
Ubp1Q811S7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Gm25144-201ENSMUST00000179561 110 ntBASIC13.91□□□□□ -0.18
Ubp1Q811S7 Gm25352-201ENSMUST00000179815 110 ntBASIC13.91□□□□□ -0.18
Ubp1Q811S7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.91□□□□□ -0.18
Ubp1Q811S7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ubp1Q811S7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms