Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Mir877-201ENSMUST00000104738 85 ntBASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Mir3547-201ENSMUST00000175461 88 ntBASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Olfr284-202ENSMUST00000206647 966 ntBASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trnp1Q80ZI1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Gm45865-201ENSMUST00000211815 945 ntBASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trnp1Q80ZI1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Gm12241-201ENSMUST00000118330 726 ntBASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Gm37259-201ENSMUST00000193903 849 ntBASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Gm37497-201ENSMUST00000195830 798 ntBASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trnp1Q80ZI1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms