Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Carlr-201ENSMUST00000181515 2574 ntBASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Usp6nlQ80XC3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Gm11814-201ENSMUST00000119515 929 ntBASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Gm26464-201ENSMUST00000157094 305 ntBASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Usp6nlQ80XC3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Gm12928-201ENSMUST00000117115 573 ntBASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Gm7561-201ENSMUST00000211203 886 ntBASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Usp6nlQ80XC3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Usp6nlQ80XC3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Gm8652-201ENSMUST00000181363 964 ntBASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Gm8927-201ENSMUST00000181978 981 ntBASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Gm45841-201ENSMUST00000207700 164 ntBASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Gm3222-201ENSMUST00000071282 990 ntBASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Usp6nlQ80XC3 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Usp6nlQ80XC3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms