Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.27■□□□□ 0.2
Prpf40bQ80W14 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prpf40bQ80W14 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Prpf40bQ80W14 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
Prpf40bQ80W14 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Gm27701-201ENSMUST00000184498 110 ntBASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Gm28911-201ENSMUST00000188837 117 ntBASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Prpf40bQ80W14 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf40bQ80W14 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms