Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Gm22189-201ENSMUST00000103822 86 ntBASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Gm42612-201ENSMUST00000197986 623 ntBASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Gm43170-201ENSMUST00000199827 612 ntBASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh19Q80TF3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Pcdh19Q80TF3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Pcdh19Q80TF3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh19Q80TF3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Pcdh19Q80TF3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Gm21854-201ENSMUST00000179901 471 ntBASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Gm5186-201ENSMUST00000218781 920 ntBASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh19Q80TF3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Gm5745-201ENSMUST00000183748 313 ntBASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Gm18027-201ENSMUST00000218947 619 ntBASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh19Q80TF3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdh19Q80TF3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms