Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Gm11745-201ENSMUST00000121669 448 ntBASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Otub1Q7TQI3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.43□□□□□ -0.26
Otub1Q7TQI3 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Otub1Q7TQI3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Gm43514-201ENSMUST00000198852 424 ntBASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Gm9182-201ENSMUST00000217829 639 ntBASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Otub1Q7TQI3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms