Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Gm6973-201ENSMUST00000117080 721 ntBASIC11.86□□□□□ -0.51
Smim12Q78RX3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Gm2651-201ENSMUST00000203560 838 ntBASIC11.86□□□□□ -0.51
Smim12Q78RX3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.86□□□□□ -0.51
Smim12Q78RX3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smim12Q78RX3 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.86□□□□□ -0.51
Smim12Q78RX3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Gm15427-201ENSMUST00000117288 531 ntBASIC11.85□□□□□ -0.51
Smim12Q78RX3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.85□□□□□ -0.51
Smim12Q78RX3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.85□□□□□ -0.51
Smim12Q78RX3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.85□□□□□ -0.51
Smim12Q78RX3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smim12Q78RX3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smim12Q78RX3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.84□□□□□ -0.51
Smim12Q78RX3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.84□□□□□ -0.51
Smim12Q78RX3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smim12Q78RX3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Gm17968-201ENSMUST00000194902 784 ntBASIC11.84□□□□□ -0.51
Smim12Q78RX3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.84□□□□□ -0.51
Smim12Q78RX3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.84□□□□□ -0.51
Smim12Q78RX3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.84□□□□□ -0.51
Smim12Q78RX3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smim12Q78RX3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms