Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
Scaf4Q6PFF0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scaf4Q6PFF0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Gm12882-201ENSMUST00000121696 517 ntBASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Gm18041-201ENSMUST00000218210 618 ntBASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Gm7461-201ENSMUST00000058918 827 ntBASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Scaf4Q6PFF0 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.9□□□□□ -0.19
Scaf4Q6PFF0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Scaf4Q6PFF0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Mir5126-201ENSMUST00000175513 77 ntBASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scaf4Q6PFF0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms