Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Gm16177-201ENSMUST00000120728 718 ntBASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Gm13123-201ENSMUST00000122173 492 ntBASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Itm2b-204ENSMUST00000228637 783 ntBASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nup98Q6PFD9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.34■□□□□ 0.21
Nup98Q6PFD9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nup98Q6PFD9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Gm29705-201ENSMUST00000212598 474 ntBASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nup98Q6PFD9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Gm26315-201ENSMUST00000083890 321 ntBASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup98Q6PFD9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup98Q6PFD9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms