Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc2Q6PDG5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc2Q6PDG5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Smarcc2Q6PDG5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smarcc2Q6PDG5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.46■□□□□ 0.22
Smarcc2Q6PDG5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Gm9719-201ENSMUST00000162765 543 ntBASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Gm44608-201ENSMUST00000206827 855 ntBASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc2Q6PDG5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Gm25144-201ENSMUST00000179561 110 ntBASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Gm25352-201ENSMUST00000179815 110 ntBASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Mir7023-201ENSMUST00000185093 64 ntBASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Gm20949-201ENSMUST00000206478 952 ntBASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Gm6888-201ENSMUST00000221983 706 ntBASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcc2Q6PDG5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms