Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Gm9719-201ENSMUST00000162765 543 ntBASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Casc4Q6P2L7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Casc4Q6P2L7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Gm27631-201ENSMUST00000184163 466 ntBASIC14.3□□□□□ -0.12
Casc4Q6P2L7 AA619741-201ENSMUST00000195095 646 ntBASIC14.3□□□□□ -0.12
Casc4Q6P2L7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Casc4Q6P2L7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Gm27618-201ENSMUST00000183671 60 ntBASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Gm27622-201ENSMUST00000183779 60 ntBASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Gm17837-201ENSMUST00000186435 985 ntBASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Gm28630-201ENSMUST00000187806 498 ntBASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Casc4Q6P2L7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms