Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm26315-201ENSMUST00000083890 321 ntBASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC21.34■■□□□ 1.01
Slx4Q6P1D7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slx4Q6P1D7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Gm21769-201ENSMUST00000211922 111 ntBASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC21.33■■□□□ 1.01
Slx4Q6P1D7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slx4Q6P1D7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC21.33■■□□□ 1
Slx4Q6P1D7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Slx4Q6P1D7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC21.33■■□□□ 1
Slx4Q6P1D7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slx4Q6P1D7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC21.33■■□□□ 1
Slx4Q6P1D7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slx4Q6P1D7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC21.32■■□□□ 1
Slx4Q6P1D7 Gm9431-201ENSMUST00000119765 1051 ntBASIC21.32■■□□□ 1
Slx4Q6P1D7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC21.32■■□□□ 1
Slx4Q6P1D7 Gm44064-201ENSMUST00000204964 1087 ntBASIC21.32■■□□□ 1
Slx4Q6P1D7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC21.32■■□□□ 1
Slx4Q6P1D7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC21.32■■□□□ 1
Slx4Q6P1D7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC21.32■■□□□ 1
Slx4Q6P1D7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC21.32■■□□□ 1
Slx4Q6P1D7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC21.32■■□□□ 1
Slx4Q6P1D7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC21.32■■□□□ 1
Slx4Q6P1D7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Slx4Q6P1D7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC21.32■■□□□ 1
Slx4Q6P1D7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Slx4Q6P1D7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Gm38102-201ENSMUST00000192791 1935 ntBASIC21.31■■□□□ 1
Slx4Q6P1D7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC21.31■■□□□ 1
Slx4Q6P1D7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Slx4Q6P1D7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Slx4Q6P1D7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Slx4Q6P1D7 Gm16379-201ENSMUST00000161469 348 ntBASIC21.31■■□□□ 1
Slx4Q6P1D7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC21.31■■□□□ 1
Slx4Q6P1D7 Gm8762-201ENSMUST00000193486 339 ntBASIC21.31■■□□□ 1
Slx4Q6P1D7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC21.31■■□□□ 1
Slx4Q6P1D7 Gm17330-201ENSMUST00000221047 165 ntBASIC21.31■■□□□ 1
Slx4Q6P1D7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC21.31■■□□□ 1
Slx4Q6P1D7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC21.31■■□□□ 1
Slx4Q6P1D7 Gm45684-201ENSMUST00000210244 1571 ntBASIC21.3■■□□□ 1
Slx4Q6P1D7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Slx4Q6P1D7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slx4Q6P1D7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC21.3■■□□□ 1
Slx4Q6P1D7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slx4Q6P1D7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC21.3■■□□□ 1
Slx4Q6P1D7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC21.3■■□□□ 1
Slx4Q6P1D7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slx4Q6P1D7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms