Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Gm6266-201ENSMUST00000203844 806 ntBASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzrn3Q69ZS0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pdzrn3Q69ZS0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Pdzrn3Q69ZS0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdzrn3Q69ZS0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Pdzrn3Q69ZS0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdzrn3Q69ZS0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdzrn3Q69ZS0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Pdzrn3Q69ZS0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Gm15460-201ENSMUST00000118147 391 ntBASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdzrn3Q69ZS0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Gm5354-201ENSMUST00000182417 973 ntBASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdzrn3Q69ZS0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.24■□□□□ 0.35
Pdzrn3Q69ZS0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms