Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.98□□□□□ -0.33
VcanQ62059 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VcanQ62059 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.97□□□□□ -0.33
VcanQ62059 Mir6958-201ENSMUST00000184207 73 ntBASIC12.97□□□□□ -0.33
VcanQ62059 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.97□□□□□ -0.33
VcanQ62059 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.97□□□□□ -0.33
VcanQ62059 Gm45118-201ENSMUST00000208928 825 ntBASIC12.97□□□□□ -0.33
VcanQ62059 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.97□□□□□ -0.33
VcanQ62059 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.97□□□□□ -0.33
VcanQ62059 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Gm5687-201ENSMUST00000118252 640 ntBASIC12.97□□□□□ -0.33
VcanQ62059 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VcanQ62059 Gm38223-201ENSMUST00000194484 695 ntBASIC12.97□□□□□ -0.33
VcanQ62059 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.97□□□□□ -0.33
VcanQ62059 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.97□□□□□ -0.33
VcanQ62059 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.97□□□□□ -0.33
VcanQ62059 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VcanQ62059 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.96□□□□□ -0.33
VcanQ62059 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcanQ62059 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcanQ62059 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcanQ62059 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcanQ62059 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.96□□□□□ -0.33
VcanQ62059 Gm8749-201ENSMUST00000117737 331 ntBASIC12.96□□□□□ -0.33
VcanQ62059 Gm14208-201ENSMUST00000119645 678 ntBASIC12.96□□□□□ -0.33
VcanQ62059 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VcanQ62059 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VcanQ62059 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.96□□□□□ -0.33
VcanQ62059 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.96□□□□□ -0.33
VcanQ62059 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.96□□□□□ -0.33
VcanQ62059 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcanQ62059 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VcanQ62059 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.96□□□□□ -0.33
VcanQ62059 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
VcanQ62059 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VcanQ62059 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcanQ62059 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcanQ62059 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VcanQ62059 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
VcanQ62059 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcanQ62059 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcanQ62059 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VcanQ62059 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.95□□□□□ -0.34
VcanQ62059 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Gm10275-202ENSMUST00000168697 495 ntBASIC12.95□□□□□ -0.34
VcanQ62059 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Gm10275-201ENSMUST00000092620 635 ntBASIC12.95□□□□□ -0.34
VcanQ62059 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VcanQ62059 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.95□□□□□ -0.34
VcanQ62059 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.95□□□□□ -0.34
VcanQ62059 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
VcanQ62059 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.95□□□□□ -0.34
VcanQ62059 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.95□□□□□ -0.34
VcanQ62059 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VcanQ62059 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VcanQ62059 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Gm13408-201ENSMUST00000119822 798 ntBASIC12.95□□□□□ -0.34
VcanQ62059 Gm13935-201ENSMUST00000121859 798 ntBASIC12.95□□□□□ -0.34
VcanQ62059 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VcanQ62059 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VcanQ62059 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VcanQ62059 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms