Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm13464-201ENSMUST00000119418 935 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm24158-201ENSMUST00000175263 71 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm27430-201ENSMUST00000184585 107 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm44333-201ENSMUST00000197168 107 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 AC129597.1-201ENSMUST00000223046 1234 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.48□□□□□ -0.73
Foxc1Q61572 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Foxc1Q61572 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Foxc1Q61572 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.47□□□□□ -0.73
Foxc1Q61572 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm20239-201ENSMUST00000196610 982 ntBASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Foxc1Q61572 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.47□□□□□ -0.73
Foxc1Q61572 Gm34272-201ENSMUST00000208886 253 ntBASIC10.47□□□□□ -0.73
Foxc1Q61572 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.47□□□□□ -0.73
Foxc1Q61572 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms