Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ift88Q61371 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ift88Q61371 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ift88Q61371 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.61■□□□□ 0.09
Ift88Q61371 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.61■□□□□ 0.09
Ift88Q61371 Gm9727-201ENSMUST00000161387 555 ntBASIC15.61■□□□□ 0.09
Ift88Q61371 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.61■□□□□ 0.09
Ift88Q61371 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.61■□□□□ 0.09
Ift88Q61371 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ift88Q61371 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ift88Q61371 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ift88Q61371 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.6■□□□□ 0.09
Ift88Q61371 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ift88Q61371 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.6■□□□□ 0.09
Ift88Q61371 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.6■□□□□ 0.09
Ift88Q61371 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.6■□□□□ 0.09
Ift88Q61371 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.6■□□□□ 0.09
Ift88Q61371 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.6■□□□□ 0.09
Ift88Q61371 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.6■□□□□ 0.09
Ift88Q61371 Mzt1-203ENSMUST00000227948 952 ntBASIC15.6■□□□□ 0.09
Ift88Q61371 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ift88Q61371 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ift88Q61371 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.59■□□□□ 0.09
Ift88Q61371 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ift88Q61371 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.59■□□□□ 0.09
Ift88Q61371 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Gm20553-201ENSMUST00000204205 844 ntBASIC15.59■□□□□ 0.09
Ift88Q61371 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.59■□□□□ 0.09
Ift88Q61371 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
Ift88Q61371 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ift88Q61371 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.59■□□□□ 0.09
Ift88Q61371 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ift88Q61371 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.59■□□□□ 0.09
Ift88Q61371 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ift88Q61371 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ift88Q61371 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ift88Q61371 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ift88Q61371 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ift88Q61371 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.58■□□□□ 0.09
Ift88Q61371 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Ift88Q61371 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ift88Q61371 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ift88Q61371 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Ift88Q61371 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Ift88Q61371 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.58■□□□□ 0.08
Ift88Q61371 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ift88Q61371 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms