Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Gm13612-201ENSMUST00000119276 390 ntBASIC12.8□□□□□ -0.36
Usf1Q61069 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.8□□□□□ -0.36
Usf1Q61069 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.8□□□□□ -0.36
Usf1Q61069 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.8□□□□□ -0.36
Usf1Q61069 Gm24644-201ENSMUST00000157114 139 ntBASIC12.8□□□□□ -0.36
Usf1Q61069 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.8□□□□□ -0.36
Usf1Q61069 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.8□□□□□ -0.36
Usf1Q61069 Gm24196-201ENSMUST00000179161 110 ntBASIC12.8□□□□□ -0.36
Usf1Q61069 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Usf1Q61069 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.8□□□□□ -0.36
Usf1Q61069 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.8□□□□□ -0.36
Usf1Q61069 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.8□□□□□ -0.36
Usf1Q61069 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Usf1Q61069 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Usf1Q61069 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Usf1Q61069 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Usf1Q61069 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf1Q61069 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Usf1Q61069 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usf1Q61069 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.79□□□□□ -0.36
Usf1Q61069 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.79□□□□□ -0.36
Usf1Q61069 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.79□□□□□ -0.36
Usf1Q61069 Gm24420-201ENSMUST00000176676 59 ntBASIC12.79□□□□□ -0.36
Usf1Q61069 Gm27772-201ENSMUST00000184900 187 ntBASIC12.79□□□□□ -0.36
Usf1Q61069 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Gm6013-201ENSMUST00000212264 699 ntBASIC12.79□□□□□ -0.36
Usf1Q61069 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.79□□□□□ -0.36
Usf1Q61069 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.79□□□□□ -0.36
Usf1Q61069 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.79□□□□□ -0.36
Usf1Q61069 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usf1Q61069 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.79□□□□□ -0.36
Usf1Q61069 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.79□□□□□ -0.36
Usf1Q61069 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.79□□□□□ -0.36
Usf1Q61069 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.79□□□□□ -0.36
Usf1Q61069 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.79□□□□□ -0.36
Usf1Q61069 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usf1Q61069 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usf1Q61069 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Usf1Q61069 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.78□□□□□ -0.36
Usf1Q61069 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usf1Q61069 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.78□□□□□ -0.36
Usf1Q61069 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Usf1Q61069 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.78□□□□□ -0.36
Usf1Q61069 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.78□□□□□ -0.36
Usf1Q61069 Gm8927-201ENSMUST00000181978 981 ntBASIC12.78□□□□□ -0.36
Usf1Q61069 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.78□□□□□ -0.36
Usf1Q61069 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Gm3222-201ENSMUST00000071282 990 ntBASIC12.78□□□□□ -0.36
Usf1Q61069 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usf1Q61069 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.78□□□□□ -0.36
Usf1Q61069 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.78□□□□□ -0.36
Usf1Q61069 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usf1Q61069 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usf1Q61069 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms