Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav5d-4Q5R1F6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5d-4Q5R1F6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5d-4Q5R1F6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5d-4Q5R1F6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5d-4Q5R1F6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trav5d-4Q5R1F6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5d-4Q5R1F6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm24513-201ENSMUST00000174964 138 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Mir6990-201ENSMUST00000183724 91 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm29310-201ENSMUST00000185468 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21825-201ENSMUST00000185728 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm29109-201ENSMUST00000185895 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21896-201ENSMUST00000186520 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21873-201ENSMUST00000186728 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21794-201ENSMUST00000187056 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21880-201ENSMUST00000187275 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21826-201ENSMUST00000187451 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21198-201ENSMUST00000188393 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21749-201ENSMUST00000189343 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21901-201ENSMUST00000189568 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm29424-201ENSMUST00000189716 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm28599-201ENSMUST00000189838 694 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21867-201ENSMUST00000189917 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm29269-201ENSMUST00000190087 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21722-201ENSMUST00000190153 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm28423-201ENSMUST00000190701 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21899-201ENSMUST00000190745 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21910-201ENSMUST00000191163 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21849-201ENSMUST00000191571 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm28678-201ENSMUST00000191593 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm20910-201ENSMUST00000193268 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm21871-201ENSMUST00000194621 696 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm44335-201ENSMUST00000196879 141 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm2213-201ENSMUST00000197485 688 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm44297-201ENSMUST00000198304 141 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm44346-201ENSMUST00000198851 141 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5d-4Q5R1F6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav5d-4Q5R1F6 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms