Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Mir125a-201ENSMUST00000083545 68 ntBASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rnf20Q5DTM8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Mir449b-201ENSMUST00000104833 80 ntBASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Gm8396-201ENSMUST00000057361 823 ntBASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf20Q5DTM8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Gm26308-201ENSMUST00000157768 69 ntBASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf20Q5DTM8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf20Q5DTM8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms