Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Gm13385-201ENSMUST00000121089 220 ntBASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf38aQ4FK66 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gm8927-201ENSMUST00000181978 981 ntBASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gm45384-201ENSMUST00000210451 277 ntBASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gm3222-201ENSMUST00000071282 990 ntBASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf38aQ4FK66 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms