Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Gm24255-201ENSMUST00000104481 128 ntBASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Rps4l-202ENSMUST00000204242 789 ntBASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Gm21769-201ENSMUST00000211922 111 ntBASIC17.17■□□□□ 0.34
Shank3Q4ACU6 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.17■□□□□ 0.34
Shank3Q4ACU6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Shank3Q4ACU6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Gm4986-201ENSMUST00000119731 549 ntBASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Nsd1-205ENSMUST00000224693 852 ntBASIC17.16■□□□□ 0.34
Shank3Q4ACU6 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank3Q4ACU6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Gm13297-201ENSMUST00000120205 934 ntBASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank3Q4ACU6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Shank3Q4ACU6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shank3Q4ACU6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Gm14381-201ENSMUST00000122105 414 ntBASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Gm27320-201ENSMUST00000184892 109 ntBASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Gm29787-201ENSMUST00000222129 849 ntBASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank3Q4ACU6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms