Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Gm14381-201ENSMUST00000122105 414 ntBASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Gm27341-201ENSMUST00000183570 106 ntBASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Gm29396-201ENSMUST00000185659 716 ntBASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Snora73a-201ENSMUST00000082453 205 ntBASIC14.09□□□□□ -0.15
Fam196aQ3USH1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.09□□□□□ -0.15
Fam196aQ3USH1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Fam196aQ3USH1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Fam196aQ3USH1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fam196aQ3USH1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fam196aQ3USH1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fam196aQ3USH1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Fam196aQ3USH1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Rps4l-202ENSMUST00000204242 789 ntBASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fam196aQ3USH1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Gm22323-201ENSMUST00000103832 109 ntBASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Gm44608-201ENSMUST00000206827 855 ntBASIC14.07□□□□□ -0.16
Fam196aQ3USH1 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fam196aQ3USH1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms