Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.25□□□□□ -0.45
Q3U1D9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Gm7653-201ENSMUST00000214567 508 ntBASIC12.25□□□□□ -0.45
Q3U1D9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.25□□□□□ -0.45
Q3U1D9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Q3U1D9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.25□□□□□ -0.45
Q3U1D9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Q3U1D9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Q3U1D9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q3U1D9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.24□□□□□ -0.45
Q3U1D9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q3U1D9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.24□□□□□ -0.45
Q3U1D9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.24□□□□□ -0.45
Q3U1D9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Gm23984-201ENSMUST00000157139 203 ntBASIC12.24□□□□□ -0.45
Q3U1D9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.24□□□□□ -0.45
Q3U1D9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q3U1D9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Q3U1D9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3U1D9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.23□□□□□ -0.45
Q3U1D9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Gm5354-201ENSMUST00000182417 973 ntBASIC12.23□□□□□ -0.45
Q3U1D9 Gm45668-201ENSMUST00000211271 493 ntBASIC12.23□□□□□ -0.45
Q3U1D9 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.23□□□□□ -0.45
Q3U1D9 Gm18624-201ENSMUST00000220966 658 ntBASIC12.23□□□□□ -0.45
Q3U1D9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3U1D9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Q3U1D9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
Q3U1D9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.22□□□□□ -0.45
Q3U1D9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Q3U1D9 Gm17795-201ENSMUST00000214505 757 ntBASIC12.22□□□□□ -0.45
Q3U1D9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.22□□□□□ -0.45
Q3U1D9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Gm6180-201ENSMUST00000065243 498 ntBASIC12.22□□□□□ -0.45
Q3U1D9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Q3U1D9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms